EMPIAR-10898 - Cryo-electron tilt series of mouse stereocilia [552 tilt series in MRC format]

EMPIAR-10898

Cryo-electron tilt series of mouse stereocilia [552 tilt series in MRC format]

Publication:

Molecular structure and conformation of stereocilia tip-links elucidated by cryo-electron tomography

Elferich J, Clark S, Ge J, Goehring A, Matsui A, Gouaux E

bioRxiv (2021)

DOI: 10.1101/2021.10.01.462800

Related EMDB entry:

EMD-25056 EMD-25059 EMD-25057 EMD-25061 EMD-25060 EMD-25058 EMD-25046 EMD-25047 EMD-25050 EMD-25051 EMD-25052 EMD-25049 EMD-25048 EMD-25053 EMD-25055 EMD-25054

Deposited:

2021-12-22

Released:

2022-01-12

Last modified:

2022-01-12

Imageset size:

1.91 TB

Imageset DOI:

10.6019/EMPIAR-10898

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Unaligned tilt series of mouse stereocilia

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

552

Image size:

(5730, 4070)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.653, 1.653)

Details:

SerialEM collection metadata is contained in the .mrc.mdoc file. The tilt angles are recorded in .rawtlt files. Dose information is contained in the .dose file, where each line corresponds to one tilt angle and contains the pre-dose in the first column and the expsoure dose in the second column.

Files:

選択したファイルを無圧縮zipファイルにアーカイブ化してダウンロードします。

ダウンロードするファイル数やサイズによっては、膨大な時間がかかります。また、この機能は不安定で正常に動作しない可能性があり、ダウンロードされたファイルのチェックサムは検証されません。

rsync、aspera、globus 等の利用をおすすめします。

選択したファイルのリストをダウンロードします。

rsyncコマンド等でファイルリストを指定してダウンロードすることが可能です。

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

Quick Links

Browse EMPIAR

Sample Preparation Widget

Volume Browser

Tomo Viewer Prototype

Claim entries to your ORCiD

Talks and Tutorials

EMPIAR Quick tour

Publications

Re-use study

Statistics

EMPIAR in the news

COVID-19 Data Portal

EMDB

BioImage Archive

PDBe

EMNavigator@PDBj

PDBj

Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）