EMPIAR-10848 - single particle cryo-EM of red blood cell lysate (hemolysate, hemoglobin reduced, filtered by SEC) [6608 multi-frame micrographs composed of 20 frames each in TIFF format]

EMPIAR-10848

single particle cryo-EM of red blood cell lysate (hemolysate, hemoglobin reduced, filtered by SEC) [6608 multi-frame micrographs composed of 20 frames each in TIFF format]

Publication:

The protein organization of a red blood cell

Sae-Lee W, McCafferty CL, Verbeke EJ, Havugimana PC, Papoulas O, McWhite CD, Houser JR, Vanuytsel K, Murphy GJ, Drew K, Emili A, Taylor DW, Marcotte EM

Cell reports 40 (2022)

PMID: 35858567

DOI: 10.1016/j.celrep.2022.111103

Related EMDB entry:

EMD-24822

Deposited:

2021-09-06

Released:

2022-06-22

Last modified:

2022-09-26

Imageset size:

1.04 TB

Imageset DOI:

10.6019/EMPIAR-10848

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multiframe micrographs of size filtered red blood cell lysate

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6608

Image size:

(None, None)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.045, 1.045)

Details:

Unaligned and uncorrected movies recorded on a K3 detector operated in counting mode. Gain can be found in references folder. Movies contain 20 frames collected over 3 seconds with a total dose of 42.5 e-/Å2.

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）