EMPIAR-10691 - Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract (lot1) [multiple data sets in TIFF format]

EMPIAR-10691

Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract (lot1) [multiple data sets in TIFF format]

Publication:

Structural features of nucleosomes in interphase and metaphase chromosomes

Arimura Y, Shih RM, Froom R, Funabiki H

Molecular cell (2021)

PMID: 34478647

DOI: 10.1016/j.molcel.2021.08.010

Related EMDB entry:

EMD-22791 EMD-22792 EMD-22796 EMD-22795

Deposited:

2021-04-10

Released:

2021-09-24

Last modified:

2021-09-24

Imageset size:

1.30 TB

Imageset DOI:

10.6019/EMPIAR-10691

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract lot1

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1456

Image size:

(7676, 7420)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.75, 0.75)

Details:

Raw micrographs of the oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract lot1. The gain reference file has been uploaded as "reference.mrc" in this folder, which is needed to be flipped (upside down) and turned 90 degrees. Total dose = 38.34 e/A^2. Talos Arctica + K2 (super-resolution mode) 200kV, Spherical Abberation= 2.7mm. The dataset contains low-quality micrographs that were removed from the analysis described in the paper.

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2. oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract lot1

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1280

Image size:

(7676, 7420)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.75, 0.75)

Details:

Raw micrographs of the oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract lot1. The data has been collected from the same grid with "micrograph1" on another machine time. The gain reference file has been uploaded as "reference.mrc" in this folder, which is needed to be flipped (upside down) and turned 90 degrees. Total dose = 35.27 e/A^2. Talos Arctica + K2 (super-resolution mode) 200kV, Spherical Abberation= 2.7mm. The dataset contains low-quality micrographs that were removed from the analysis described in the paper.

Files:

選択したファイルを無圧縮zipファイルにアーカイブ化してダウンロードします。

rsync、aspera、globus 等の利用をおすすめします。

選択したファイルのリストをダウンロードします。

rsyncコマンド等でファイルリストを指定してダウンロードすることが可能です。

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）