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EMPIAR-10617
Dynabeads as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format]
Publication:

Sample preparation strategies for efficient correlation of 3D imaging data at cryogenic temperatures: the journey towards multimodal bioimaging

Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M

Nature Protocols (2021)

Related EMDB entry:
Deposited:
2021-01-18
Released:
2021-03-05
Last modified:
2021-08-20
Imageset size:
1.25 GB
Imageset DOI:
10.6019/EMPIAR-10617
Experimental metadata:
Download xml json
Contains:
  • tilt series
Image Sets
1. SXT using dynbeads as fiducials
Category:
tilt series
Image format:
MRC
No. of images or tilt series:
700
Image size:
(946, 946)
Pixel type:
SIGNED 16 BIT INTEGER
Pixel spacing:
(160.0, 160.0)
Details:
---
Files:
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Citations
AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.
Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)
A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.
Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)
Helical reconstruction of amyloids in cryoSPARC.
Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)
An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.
Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)
CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.
Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)
prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.
He L, Bartesaghi A. (2026)
CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.
Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)
Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.
Kong L, Zottig X, Elferich J, Grigorieff N. (2026)
CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.
Gyawali R, Dhakal A, Wang L, Cheng J. (2026)
CryoWriter: a robotic solution for improved Cryo-EM grid preparation.
Kv C, Ekundayo B, Di Fabrizio M, Mohammed I, Radecke J, Stahlberg H, Kube M. (2026)
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