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EMPIAR-10516
Cryo electron microscopy of SARS-CoV-2 spike in prefusion state [3207 multi-frame micrographs composed of 30 frames each in MRC format]
Publication:

Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures

Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM

IUCrJ 7 (2020)

PMID: 33063791

Related EMDB entry:
EMD-11336 EMD-11328 EMD-11337
Deposited:
2020-09-22
Released:
2020-10-12
Last modified:
2022-05-12
Imageset size:
2.06 TB
Imageset DOI:
10.6019/EMPIAR-10516
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
Image Sets
1. 2.outputMovies
Category:
micrographs - multiframe
Image format:
MRC
No. of images or tilt series:
3207
Image size:
(5760, 4092)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(1.047, 1.047)
Details:
data/SARS-CoV-2-spike/workflow.json
Files:
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Citations
prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.
He L, Bartesaghi A. (2026)
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Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.
Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)
CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.
Gyawali R, Dhakal A, Wang L, Cheng J. (2026)
Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.
Jones HN, Deshmukh A, Pande K. (2026)
CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting
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Point cloud deformation modeling for particle selection following cryo-EM 2D classification.
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