EMPIAR-10418
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format]
Publication:

3D Correlative Cryo-Structured Illumination Fluorescence and Soft X-ray Microscopy Elucidates Reovirus Intracellular Release Pathway

Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M

Cell 182 (2020) 515-530.e17

PMID: 32610083

Related EMDB entry:
Deposited:
2020-05-11
Released:
2020-06-30
Last modified:
2022-02-08
Imageset size:
1.17 GB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • tilt series
1. Tomogram of reovirus-infected U2OS cells 4h post-infection (Area 1)
Category:
tilt series
Image format:
MRC
No. of images or tilt series:
1
Image size:
(946, 946)
Pixel type:
SIGNED 16 BIT INTEGER
Pixel spacing:
(160.0, 160.0)
Details:
Tomogram of reovirus-infected U2OS cells 4h post-infection (Area 1)
EMPIAR entry 10418: U2OS_Reo_4hPI_Area1_Reconstruction (S-BIAD20)


Note:
Associated with EMPIAR entry 10419 (adjacent/overlapping FOVs)

Sample characteristics:
Substrate = Quantifoil F1 2/2
Fiducials = Au 250nm nanospheres

Data collection:
Data collected at beamline B24 at Diamond Light source
Data collected 15th Feb 2018
Allocation award ID MX18314

Tilt series:
-60deg to 60deg
1deg step
Total frames 121
1sec exposure

Microscope make:
Zeiss UltraXRM-S220C

Data collection software:
XRM Controller

Microscope setup:
Energy: 500eV
Magnification = x812.5
FOV = 16microns
pixel size = 16x16nm
Zoneplate = 40nm

Data processing:
Type = Automated
Software = Batchruntomo
Alignment protocol = WBP
Files:
Loading...
Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)
Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)
Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)