EMPIAR logo

Electron Microscopy Public Image Archive

EMPIAR-10018
GroEL dataset - NRAMM (06jul12a) [186 micrographs in MRC format]
Publication:

Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.

Stagg SM, Lander GC, Pulokas J, Fellmann D, Cheng A, Quispe JD, Mallick SP, Avila RM, Carragher B, Potter CS

J Struct Biol 155 (2006) 470-481

PMID: 16762565

Related EMDB entry:
EMD-1200
Deposited:
2014-11-17
Released:
2015-10-09
Last modified:
2015-10-09
Imageset size:
6.96 GB
Imageset DOI:
10.6019/EMPIAR-10018
Experimental metadata:
Download xml json
Version history:
1
2015-10-09
REL
Changed the associated EMD entry from 5336 to 1200
2
2015-10-28
REL
Restructured the entry directory to have "data" and ".private".
Contains:
  • micrographs - single frame
Image Sets
1. Groel micrographs
Category:
micrographs - single frame
Image format:
MRC
No. of images or tilt series:
186
Image size:
(4096, 4096)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(1.63, 1.63)
Details:
---
Files:
Loading...
Browse All Files
Quick Links
Browse EMPIAR
Sample Preparation Widget
Volume Browser
Tomo Viewer Prototype
Claim entries to your ORCiD
Talks and Tutorials
EMPIAR Quick tour
Publications
Re-use study
Statistics
EMPIAR in the news
Contact us
COVID-19 Data Portal
EMDB
BioImage Archive
PDBe
EMNavigator@PDBj
PDBj
Citations
A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.
Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)
CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.
Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)
CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.
Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)
prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.
He L, Bartesaghi A. (2026)
Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.
Kong L, Zottig X, Elferich J, Grigorieff N. (2026)
Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.
Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)
CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.
Gyawali R, Dhakal A, Wang L, Cheng J. (2026)
Dual site targeting of the bacterial 70S ribosome by tetracyclines.
Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)
Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.
Jones HN, Deshmukh A, Pande K. (2026)
CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting
Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)
See all citations
Protein Data Bank Japan News
[2026-06-10]
333件のPDBエントリーが新たに公開されました。（2026-06-10付）
[2026-05-19]
[wwPDB] PDB Versioned および NextGen アーカイブにおける rsync利用の変更
[2026-05-14]
第26回日本蛋白質科学会年会にてランチョンセミナーを開催します
[2026-04-30]
[wwPDB] 2027年7月21日以降に公開されるエントリーについてPDB DOIの構文が新しくなります
[2026-04-26]
[wwPDB] 2027年7月21日に、PDBベータアーカイブが現行アーカイブに置き換わります
[2026-04-21]
[wwPDB] PDBとEMDBエントリーの公開済みの検証レポートを更新しました
[2026-03-30]
PDBj Newsletter Vol.26公開のお知らせ
[2026-03-13]
[wwPDB] CASP17（2026）ターゲットを募集しています
[2026-03-07]
[wwPDB] PDBエントリーが25万件を達成しました
[2026-02-11]
[wwPDB] 新しいPDBベータアーカイブをテスト用にご利用ください
See all news