EMPIAR-10017 - Beta-galactosidase Falcon-II micrographs plus manually selected coordinates by Richard Henderson [84 micrographs in MRC format]

EMPIAR-10017

Beta-galactosidase Falcon-II micrographs plus manually selected coordinates by Richard Henderson [84 micrographs in MRC format]

Publication:

Semi-automated selection of cryo-EM particles in RELION-1.3.

Scheres SH

J Struct Biol 189 (2015) 114-122

PMID: 25486611

DOI: doi:10.1016/j.jsb.2014.11.010

Related EMDB entry:

EMD-2824

Deposited:

2014-11-19

Released:

2014-11-19

Last modified:

2014-11-19

Imageset size:

5.25 GB

Imageset DOI:

10.6019/EMPIAR-10017

Experimental metadata:

Download xml json

Version history:

2015-10-28

REL

Restructured the entry directory to have "data" and ".private".

Contains:

micrographs - single frame

Image Sets

1. Beta-galactosidase micrographs + coordinates

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.77, 1.77)

Details:

Particle positions in corresponding .coord text files (with X and Y coordinates for manually selected coordinates in 1st and 2nd column respectively).
The micrographs are the average, without any realignment, of 24 raw movie frames (accumulating 24 electron per squared Angstrom in a 1.5 second exposure).

Files:

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Citations

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

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Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

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Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-17]

324件のPDBエントリーが新たに公開されました。（2026-06-17付）