EMPIAR-10643 - Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format]

EMPIAR-10643

Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format]

Publication:

High-resolution in situ structure determination by cryo-electron tomography and subtomogram averaging using emClarity

Ni T, Frosio T, Mendonça L, Sheng Y, Clare D, Himes BA, Zhang P

Nature protocols 17 (2022) 421-444

PMID: 35022621

DOI: 10.1038/s41596-021-00648-5

Related EMDB entry:

EMD-13390

Deposited:

2021-02-19

Released:

2021-04-23

Last modified:

2022-02-28

Imageset size:

25.63 GB

Imageset DOI:

10.6019/EMPIAR-10643

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Motion-corrected tilt-series

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.179, 1.179)

Details:

Assembled and ordered tilt-series. 41 tilts. -/+ 60 degrees every 3 degrees.

The files were submitted in .fixed format due to a program used by the authors. We renamed them back to .mrc for our software to work with depositor permission.

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Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

Outer membrane protein assembly mediated by BAM-SurA complexes.

Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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