EMPIAR-10025 - T20S Proteasome at 2.8 Å Resolution [multiple data sets in MRC format]

EMPIAR-10025

T20S Proteasome at 2.8 Å Resolution [multiple data sets in MRC format]

Publication:

2.8 Angstrom resolution reconstruction of the Thermoplasma acidophilum 20S proteasome using cryo-electron microscopy.

Campbell MG, Veesler D, Cheng A, Potter CS, Carragher B

Elife 4 (2015) e06380-e06380

PMID: 25760083

DOI: doi:10.7554/eLife.06380

Related EMDB entry:

EMD-6287

Deposited:

2015-02-26

Released:

2015-03-06

Last modified:

2015-03-06

Imageset size:

1.97 TB

Imageset DOI:

10.6019/EMPIAR-10025

Experimental metadata:

Download xml json

Version history:

2015-07-01

REL

Added Relion star file with coordinates: data/14sep05c_raw_196/run1_shiny_mp007_data_dotstar.txt

Contains:

micrographs - multiframe
micrographs - single frame

Image Sets

1. Raw movies

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

196

Image size:

(7420, 7676)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.66, 0.66)

Details:

Super-resolution data-acquisition. dark-amibox05-0.mrc and norm-amibox05-0.mrc are used for gain correction.
run1_shiny_mp007_data_dotstar.txt is a Relion star file with particle coordinates etc.

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2. Frame-averaged micrographs

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

196

Image size:

(7420, 7676)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.66, 0.66)

Details:

Super-resolution data-acquisition.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

3. Aligned multi-frame micrographs

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

196

Image size:

(7420, 7676)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.66, 0.66)

Details:

Super-resolution data-acquisition.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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