EMPIAR-10011 - Full virus map of Brome Mosaic Virus (picked particles) [stack of 35142 particles in IMAGIC format]

EMPIAR-10011

Full virus map of Brome Mosaic Virus (picked particles) [stack of 35142 particles in IMAGIC format]

Publication:

An atomic model of brome mosaic virus using direct electron detection and real-space optimization

Wang Z, Hryc CF, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W

Nat Commun 5 (2014) 4808-4808

PMID: 25185801

DOI: doi:10.1038/ncomms5808

Related EMDB entry:

EMD-6000

Deposited:

2014-09-08

Released:

2014-09-09

Last modified:

2014-09-09

Imageset size:

24.83 GB

Imageset DOI:

10.6019/EMPIAR-10011

Experimental metadata:

Download xml json

Version history:

2015-10-27

REL

Restructured the entry directory to have "data" and ".private".

Contains:

picked particles - single frame - processed

Image Sets

1. Brome Mosaic Virus boxed particles

Category:

picked particles - single frame - processed

Image format:

IMAGIC

No. of images or tilt series:

35142

Image size:

(420, 420)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.99, 0.99)

Details:

Each particle is a frame averaged image. Data-set is related to micrographs in EMPIAR-10010.

Files:

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Citations

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy.

Krentzel D, Elphick M, Domart MC, Peddie CJ, Laine RF, Shand C, Henriques R, Collinson LM, Jones ML. (2025)

CryoEMNet driven symmetry-aware molecular reconstruction through deep learning enhanced electron microscopy.

Arora S, Pan SH, Kumar S, Singh SK, Chauhan U, Alhalabi W, Arya V, Alsulami BS, Hsu CH, Chui KT, Gupta BB. (2025)

PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning.

Costa-Gomes B, Greer J, Juraschko N, Parkhurst J, Mirecka J, Famili M, Rangel-Smith C, Strickson O, Lowe A, Basham M, Burnley T. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

Laser flash melting cryo-EM samples to overcome preferred orientation.

Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

EMICSS: added-value annotations for EMDB entries.

Duraisamy AK, Fonseca N, Kleywegt GJ, Patwardhan A, Morris KL. (2025)

Global conformations of <i>Pichia pastoris</i> complex I are distinguished by the binding of a unique interdomain bridging subunit.

Lee CS, Grba DN, Wright JJ, Ivanov BS, Hirst J. (2025)

Overcoming Preferred Orientation in Cryo-EM With Ultrasonic Excitation During Vitrification

Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ. (2025)

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