EMPIAR-13125 - Single particle cryo-EM dataset of the light-driven sodium pump ErNaR prepared by jet vitrification [13007 multi-frame micrographs composed of 50 frames each in EER format]

EMPIAR-13125

Single particle cryo-EM dataset of the light-driven sodium pump ErNaR prepared by jet vitrification [13007 multi-frame micrographs composed of 50 frames each in EER format]

Publication:

Microsecond Time-Resolved Cryo-EM Based on Jet Vitrification

Haubner M, Williams HM, Hruby J, Straub MS, Guskov A, Kovalev K, Drabbels M, Lorenz UJ

bioRxiv (2025)

DOI: 10.1101/2025.11.21.689681

Related EMDB entry:

EMD-55765

Deposited:

2025-11-20

Released:

2026-03-24

Last modified:

2026-03-24

Imageset size:

3.65 TB

Imageset DOI:

10.6019/EMPIAR-13125

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Raw micrographs of the light-driven sodium pump ErNaR prepared by jet vitrification

Category:

micrographs - multiframe

Image format:

EER

No. of images or tilt series:

13007

Image size:

(4096, 4096)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.726, 0.726)

Details:

---

Files:

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)