EMPIAR-13010 - Human VDAC1 in cMSP1D1 circularized nanodiscs, dimeric form. [multiple data sets in EER and MRC formats]

EMPIAR-13010

Human VDAC1 in cMSP1D1 circularized nanodiscs, dimeric form. [multiple data sets in EER and MRC formats]

Publication:

Structural basis of apoptosis induction by the mitochondrial voltage dependent anion channel

Daniilidis M, Gunsel U, Broutzakis G, Janowski R, Leitl KD, Fredriksson K, Niessing D, Gatsogiannis C, Hagn F

(---)

Related EMDB entry:

EMD-55062

Deposited:

2025-09-15

Released:

2025-12-01

Last modified:

2025-12-01

Imageset size:

2.24 TB

Imageset DOI:

10.6019/EMPIAR-13010

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
picked particles - single frame - processed

Image Sets

1. Unaligned multi-frame micrographs of mainly dimeric Human VDAC1 in cMSP1D1 circularized nanodiscs

Category:

micrographs - multiframe

Image format:

EER

No. of images or tilt series:

12000

Image size:

(4096, 4096)

Pixel type:

BIT

Pixel spacing:

(0.454, 0.454)

Details:

---

Files:

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2. Particle stacks and locations of Human VDAC1 in cMSP1D1 circularized nanodiscs

Category:

picked particles - single frame - processed

Image format:

MRC

No. of images or tilt series:

31802

Image size:

(164, 164)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.3463, 1.3463)

Details:

---

Files:

This entry cannot be downloaded from PDBj.

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Citations

GTpick: A deep neural network for Cryo-EM particle detection.

Ni S, Yang C, Liu Y, Zhang Y, Shi Y, Qian A, Kong R, Chang S. (2025)

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy.

Krentzel D, Elphick M, Domart MC, Peddie CJ, Laine RF, Shand C, Henriques R, Collinson LM, Jones ML. (2025)

PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning.

Costa-Gomes B, Greer J, Juraschko N, Parkhurst J, Mirecka J, Famili M, Rangel-Smith C, Strickson O, Lowe A, Basham M, Burnley T. (2025)

CryoEMNet driven symmetry-aware molecular reconstruction through deep learning enhanced electron microscopy.

Arora S, Pan SH, Kumar S, Singh SK, Chauhan U, Alhalabi W, Arya V, Alsulami BS, Hsu CH, Chui KT, Gupta BB. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

Localization of macromolecules in crowded cellular cryo-electron tomograms from extremely sparse labels.

Uddin MR, Ahmed AY, Tabib HMS, Tahmid MT, Alam MZU, Freyberg Z, Xu M. (2025)

Structural insight into bicarbonate-mediated carboxylation by human vitamin K-dependent carboxylase.

Wu K, Wang Z, Yao D, Li S, Wang X, Zhang Y, Cao M, Shen Y, Xing S, Wu J, Lei M, Lan P. (2025)

Conserved hydrophilic checkpoints tune FocA-mediated formate:H<sup>+</sup> symport.

Tüting C, Janson K, Kammel M, Ihling C, Lorenz J, Kyrilis FL, Hamdi F, Erdmann C, Sinz A, Sawers RG, Kastritis PL. (2025)

Icecream: High-Fidelity Equivariant Cryo-Electron Tomography

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2025)

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