EMPIAR-12921 - Structure of the RhGB07 Prefusion, Closed-state trimeric spike protein [7842 multi-frame micrographs composed of 1 frames each in MRC format]

EMPIAR-12921

Structure of the RhGB07 Prefusion, Closed-state trimeric spike protein [7842 multi-frame micrographs composed of 1 frames each in MRC format]

Publication:

Understanding the future risk of bat coronavirus spillover into humans – correlating sarbecovirus receptor usage, host range, and antigenicity

Ni D, Lau K, Ekundayo B, Thakur N, Newman J, Seow J, Hay AL, Li Y, Upadhyay A, Peacock TP, Doores K, Bailey D

(2025)

Related EMDB entry:

EMD-53938

Deposited:

2025-08-12

Released:

2025-11-19

Last modified:

2025-11-19

Imageset size:

490.13 GB

Imageset DOI:

10.6019/EMPIAR-12921

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Structure of the RhGB07 Prefusion, Closed-state trimeric spike protein

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

7842

Image size:

(4096, 4096)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(0.83, 0.83)

Details:

doseweighted, motion corrected micrographs collected with a Falcon 4 camera

Files:

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Citations

AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.

Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

Helical reconstruction of amyloids in cryoSPARC.

Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

See all citations

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