EMPIAR-12864 - Cryo electron tomography of PR/8/34 influenza A virus [multiple data sets in TIFF format]

EMPIAR-12864

Cryo electron tomography of PR/8/34 influenza A virus [multiple data sets in TIFF format]

Publication:

Subnanometer-resolution structural determination of hemagglutinin from cryo-electron tomography of influenza viruses

Huang QJ, McDaniel CN, Schiffer CA, Somasundaran M, Griffith AA

(---)

DOI: 10.3791/68636

Related EMDB entry:

Deposited:

2025-07-02

Released:

2025-12-21

Last modified:

2025-12-21

Imageset size:

33.58 GB

Imageset DOI:

10.6019/EMPIAR-12864

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Unaligned, multi-frame micrographs of tilt series containing influenza A virus (PR/8/34)

Category:

tilt series

Image format:

TIFF

No. of images or tilt series:

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.04375, 1.04375)

Details:

Information on all tilt series in corresponding .mrc.mdoc files. The .mrc.mdoc files refer to 4x binned output tiltseries whereas raw frames were collected at 0.5x bin. The raw frames have not been gain corrected nor aligned.

Files:

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2. Unaligned, multi-frame micrographs of tilt series containing influenza A virus (PR/8/34)

Category:

tilt series

Image format:

TIFF

No. of images or tilt series:

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(2.0873, 2.0873)

Details:

Information on all tilt series in corresponding .mrc.mdoc files. The .mrc.mdoc files refer to 4x binned output tiltseries whereas raw frames were collected at 1x bin. The raw frames have not been gain corrected nor aligned.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

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Citations

GTpick: A deep neural network for Cryo-EM particle detection.

Ni S, Yang C, Liu Y, Zhang Y, Shi Y, Qian A, Kong R, Chang S. (2025)

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy.

Krentzel D, Elphick M, Domart MC, Peddie CJ, Laine RF, Shand C, Henriques R, Collinson LM, Jones ML. (2025)

CryoEMNet driven symmetry-aware molecular reconstruction through deep learning enhanced electron microscopy.

Arora S, Pan SH, Kumar S, Singh SK, Chauhan U, Alhalabi W, Arya V, Alsulami BS, Hsu CH, Chui KT, Gupta BB. (2025)

PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning.

Costa-Gomes B, Greer J, Juraschko N, Parkhurst J, Mirecka J, Famili M, Rangel-Smith C, Strickson O, Lowe A, Basham M, Burnley T. (2025)

DiameTR: A cryo-EM tool for diameter sorting of tubular samples.

Peng R, Elkhaligy H, Grant T, Stagg SM. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

Localization of macromolecules in crowded cellular cryo-electron tomograms from extremely sparse labels.

Uddin MR, Ahmed AY, Tabib HMS, Tahmid MT, Alam MZU, Freyberg Z, Xu M. (2025)

Structural insight into bicarbonate-mediated carboxylation by human vitamin K-dependent carboxylase.

Wu K, Wang Z, Yao D, Li S, Wang X, Zhang Y, Cao M, Shen Y, Xing S, Wu J, Lei M, Lan P. (2025)

Conserved hydrophilic checkpoints tune FocA-mediated formate:H<sup>+</sup> symport.

Tüting C, Janson K, Kammel M, Ihling C, Lorenz J, Kyrilis FL, Hamdi F, Erdmann C, Sinz A, Sawers RG, Kastritis PL. (2025)

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