EMPIAR-12517
Dataset 1: Complex 1 - 30S ribosome with IF1/2/3, tRNA, and GE81112 [multiple data sets in MRCS format]
Publication:

A binding site for the antibiotic GE81112 in the ribosomal mRNA channel

Schedlbauer A, Han X, van Bakel W, Kaminishi T, Ochoa-Lizarralde B, Iturrioz I, Çapuni R, Parry R, Zegarra R, Gil-Carton D, López-Alonso JP, Sanz KB, Brandi L, Gualerzi CO, Fucini P, Connell SR

bioRxiv (2024)

Related EMDB entry:
Deposited:
2024-11-17
Released:
2025-08-01
Last modified:
2025-08-01
Imageset size:
515.21 GB
Imageset DOI:
Experimental metadata:
Download xml json

Compressed by PDBj:

Image formats and pixel types shown below are those of the original, non-compressed files.

Movies (FoilHole*.mrcs) in this entry were compressed to TIFF by EMPIAR Japan to save space and bandwidth.
The compression is lossless in that all pixel intensities remain exactly the same after decompression.
However, some metadata in the MRC header were lost.
The original files before compression are available from EMPIAR EBI.

Compression was carried out by separating (“un-normalizing”) the gain.
The details of the method are described in
https://relion.readthedocs.io/en/release-3.1/Reference/MovieCompression.html#gain-normalised-movies.

Please apply the gain reference (data/PID16{04,21}/gain-reference.mrc) during processing.

Original size:   5,450,863,630 kilobytes
Compressed size:   540,242,830 kilobytes
Contains:
  • micrographs - multiframe
1. Unaligned movies from session PID1604
Category:
micrographs - multiframe
Image format:
MRCS
No. of images or tilt series:
1820
Image size:
(3838, 3710)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(None, None)
Details:
---
Files:
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2. Unaligned movies from session PID1621
Category:
micrographs - multiframe
Image format:
MRCS
No. of images or tilt series:
1925
Image size:
(3838, 3710)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(None, None)
Details:
---
Files:
Loading...
Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)
Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)
Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)