EMPIAR-12446 - Cryo electron micrographs of Coxsackievirus A9 bound with CL213 [12618 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-12446

Cryo electron micrographs of Coxsackievirus A9 bound with CL213 [12618 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

SAR Analysis of Novel Coxsackie virus A9 Capsid Binders

Tammaro C, Plavec Z, Myllymäki L, Mitchell C, Consalvi S, Biava M, Ciogli A, Domanska A, Leppilampi V, Buckner C, Manetto S, Sciò P, Coluccia A, Laajala M, Dondio GM, Bigogno C, Marjomäki V, Butcher SJ, Poce G

Journal of medicinal chemistry 67 (2024) 17144-17161

PMID: 39292620

DOI: 10.1021/acs.jmedchem.4c00701

Related EMDB entry:

EMD-50636

Deposited:

2024-11-13

Released:

2025-02-03

Last modified:

2025-02-03

Imageset size:

4.94 TB

Imageset DOI:

10.6019/EMPIAR-12446

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Cryo-EM movies of Coxsackievirus A9 bound with CL213

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

12618

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.06, 1.06)

Details:

Micrographs collected with 300 kV FEI Titan Krios. Dose of 36.6 electrons per square angstrom. Defocus range of -0.4 to -2 um. Images collected at 81kx nominal magnification.

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)