EMPIAR-12189 - Cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA [2128 multi-frame micrographs composed of 30 frames each in MRC format]

EMPIAR-12189

Cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA [2128 multi-frame micrographs composed of 30 frames each in MRC format]

Publication:

Conserved hydrophilic checkpoints tune FocA-mediated formate:H+ symport

Tueting C, Janson K, Michelle K, Ihling C, Kyrilis FL, Hamdi F, Erdmann C, Sinz A, Sawers RG, Kastritis PL

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DOI: 10.1038/s41467-025-65159-3

Related EMDB entry:

EMD-51034

Deposited:

2024-07-15

Released:

2025-10-22

Last modified:

2025-10-22

Imageset size:

1.99 TB

Imageset DOI:

10.6019/EMPIAR-12189

Experimental metadata:

Download xml json

Compressed by PDBj:

Image formats and pixel types shown below are those of the original, non-compressed files.

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Contains:

micrographs - multiframe

Image Sets

1. Unaligned micrographs of the solublized wildtype FocA

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

2128

Image size:

(4096, 4096)

Pixel type:

SIGNED 16 BIT INTEGER

Pixel spacing:

(0.5918, 0.5918)

Details:

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Files:

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)