EMPIAR-11645 - Cryo-EM structure of ERGIC-53 H34 deletion mutant in complex with MCFD2 [6175 multi-frame micrographs composed of 50 frames each in TIFF format]

EMPIAR-11645

Cryo-EM structure of ERGIC-53 H34 deletion mutant in complex with MCFD2 [6175 multi-frame micrographs composed of 50 frames each in TIFF format]

Publication:

Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport

Watanabe S, Kise Y, Yonezawa K, Inoue M, Shimizu N, Nureki O, Inaba K

Nature communications 15 (2024)

PMID: 38493152

DOI: 10.1038/s41467-024-46747-1

Related EMDB entry:

EMD-36482

Deposited:

2023-08-07

Released:

2024-05-13

Last modified:

2024-05-13

Imageset size:

1.38 TB

Imageset DOI:

10.6019/EMPIAR-11645

Experimental metadata:

Download xml json

Deposited via PDBj

Contains:

micrographs - multiframe

Image Sets

1. raw movies for ERGIC-53 H34 deletion mutant in complex with MCFD2

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6175

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.788, 0.788)

Details:

CountCDSRef_wata211102A3_204-1_000.mrc as a gain reference without rotation and flipping.
Digits (00 to 24) represent the beam shift directions. Beam tilts were refined per direction.

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Citations

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy.

Krentzel D, Elphick M, Domart MC, Peddie CJ, Laine RF, Shand C, Henriques R, Collinson LM, Jones ML. (2025)

CryoEMNet driven symmetry-aware molecular reconstruction through deep learning enhanced electron microscopy.

Arora S, Pan SH, Kumar S, Singh SK, Chauhan U, Alhalabi W, Arya V, Alsulami BS, Hsu CH, Chui KT, Gupta BB. (2025)

PERC: a suite of software tools for the curation of cryoEM data with application to simulation, modeling and machine learning.

Costa-Gomes B, Greer J, Juraschko N, Parkhurst J, Mirecka J, Famili M, Rangel-Smith C, Strickson O, Lowe A, Basham M, Burnley T. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

Laser flash melting cryo-EM samples to overcome preferred orientation.

Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

EMICSS: added-value annotations for EMDB entries.

Duraisamy AK, Fonseca N, Kleywegt GJ, Patwardhan A, Morris KL. (2025)

Global conformations of <i>Pichia pastoris</i> complex I are distinguished by the binding of a unique interdomain bridging subunit.

Lee CS, Grba DN, Wright JJ, Ivanov BS, Hirst J. (2025)

Overcoming Preferred Orientation in Cryo-EM With Ultrasonic Excitation During Vitrification

Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ. (2025)

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