EMPIAR-11032 - Single-particle reconstruction of Tick-borne encephalitis virus (Preparation 1) [14135 multi-frame micrographs composed of 30 frames each in MRC format]

EMPIAR-11032

Single-particle reconstruction of Tick-borne encephalitis virus (Preparation 1) [14135 multi-frame micrographs composed of 30 frames each in MRC format]

Publication:

Molecular Organisation of Tick-Borne Encephalitis Virus

Pulkkinen LIA, Barrass SV, Domanska A, Överby AK, Anastasina M, Butcher SJ

Viruses 14 (2022)

PMID: 35458522

DOI: 10.3390/v14040792

Related EMDB entry:

EMD-14516

Deposited:

2022-04-05

Released:

2022-05-20

Last modified:

2022-05-20

Imageset size:

6.22 TB

Imageset DOI:

10.6019/EMPIAR-11032

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Preparation 1 unaligned movies

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

14135

Image size:

(3710, 3838)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.82, 0.82)

Details:

Unaligned movie stacks. Gain-reference images are also provided.

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Citations

AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.

Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

Helical reconstruction of amyloids in cryoSPARC.

Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

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