EMPIAR-10514 - Cryo electron microscopy of SARS-CoV-2 stabilized spike in prefusion state [3511 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-10514

Cryo electron microscopy of SARS-CoV-2 stabilized spike in prefusion state [3511 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures

Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM

IUCrJ 7 (2020)

PMID: 33063791

DOI: 10.1107/s2052252520012725

Related EMDB entry:

EMD-11341

Deposited:

2020-09-22

Released:

2020-09-28

Last modified:

2022-05-12

Imageset size:

865.02 GB

Imageset DOI:

10.6019/EMPIAR-10514

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. 302.outputMovies

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

3511

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.08, 1.08)

Details:

data/SARS-CoV-2-spike-prefusion/workflow.json

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)