EMPIAR-10339 - Cryo-ET of cryosections of S. pombe cells in G1 arrest and in G0 quiescence [20 tilt series in MRC format]

EMPIAR-10339

Cryo-ET of cryosections of S. pombe cells in G1 arrest and in G0 quiescence [20 tilt series in MRC format]

Publication:

Macromolecular and cytological changes in fission yeast G0 nuclei

Tan ZY, Cai 蔡舒君 S, Paithankar SA, Liu T, Nie X, Shi J, Gan 甘露 L

Journal of cell science 138 (2025)

PMID: 40013339

DOI: 10.1242/jcs.263654

Related EMDB entry:

EMD-0875

Deposited:

2019-11-24

Released:

2025-06-10

Last modified:

2025-06-10

Imageset size:

439.84 GB

Imageset DOI:

10.6019/EMPIAR-10339

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Tilt series and tomograms of cryosections and cryolamellae of fission yeast cells: G0 quiescence, G1-arrested, proliferating, and TSA-treated nitrogen-starved

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4096, 4096)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(None, None)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

Depending on the number and size of files to be downloaded, this can take an enormous amount of time. Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

Quick Links

Browse EMPIAR

Sample Preparation Widget

Volume Browser

Tomo Viewer Prototype

Claim entries to your ORCiD

Talks and Tutorials

EMPIAR Quick tour

Publications

Re-use study

Statistics

EMPIAR in the news

COVID-19 Data Portal

EMDB

BioImage Archive

PDBe

EMNavigator@PDBj

PDBj

Citations

CryoTriplane: triplane-based neural radiance field representation for high-resolution cryo-EM 3D homogeneous reconstruction.

Cheng Y, He B, Zeng Q, Zhang F, Han R. (2026)

Structural identification of the RY12 domain of RyR1 as an ADP sensor and the target of the malignant hyperthermia therapeutic dantrolene.

Kim K, Li H, Yuan Q, Melville Z, Zalk R, des Georges A, Frank J, Hendrickson WA, Marks AR, Clarke OB. (2026)

Post-acquisition super resolution for cryo-electron microscopy.

Burton Smith RN, Murata K. (2026)

Structural heterogeneity of CTE Type I tau filaments with an interface-shifted polymorph

Watanabe R, Lee EB. (2026)

Agentic cryo-EM structure determination with CryoPilot

--- (2026)

Ligand-induced activation of RyR1 in native membranes.

Mikirtumov V, Golusik S, Huo R, Sprink T, Balyschew N, Yang W, Diebolder C, Yuan S, Kotecha A, Kudryashev M. (2026)

QwenCryoMarker: a universal post-processing framework for contamination-aware particle cleaning.

Sun Y, Zhao J, Xu N, Wang L, Ding W, Li M. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoMV: Structure-Prior-Guided Modeling and Real-Particle Validation of Continuous Conformational Transitions in Cryo-EM

Li F, Dong H, Tang S, Wang X, Zhang C, Ji C, Han R, Zhang F, Wan X. (2026)

Easymode: general pretrained networks for cellular cryo-ET enable flexible approaches to subtomogram averaging

So-Last MGF, Burt A, Hale T, Allegretti M. (2026)

See all citations

Protein Data Bank Japan News

[2026-11-04]

932 new PDB entries have been released on 2026-11-04.

[2026-10-21]

Luncheon Seminar at the 'ICBBS2026‘ on 26 November!

[2026-10-20]

[wwPDB] PDB's Emerald Anniversary