EMPIAR-10302 - Cryo electron tomography of spinach leaf tissue [1 tilt series in MRC format]

EMPIAR-10302

Cryo electron tomography of spinach leaf tissue [1 tilt series in MRC format]

Publication:

VHUT-cryo-FIB, a method to fabricate frozen hydrated lamellae from tissue specimens for in situ cryo-electron tomography

Zhang J, Zhang D, Sun L, Ji G, Huang X, Niu T, Xu J, Ma C, Zhu Y, Gao N, Xu W, Sun F

Journal of structural biology 213 (2021)

PMID: 34174447

DOI: 10.1016/j.jsb.2021.107763

Related EMDB entry:

EMD-0733

Deposited:

2019-08-07

Released:

2021-11-08

Last modified:

2021-11-08

Imageset size:

2.23 GB

Imageset DOI:

10.6019/EMPIAR-10302

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Unaligned tilt series of cryo lamella of spinach leaf

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(3838, 3710)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(2.65, 2.65)

Details:

---

Files:

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Citations

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)