EMPIAR-10094 - Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format]

EMPIAR-10094

Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset) [518 micrographs in DM4 format]

Publication:

Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset)

Collinson LM

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Related EMDB entry:

Deposited:

2017-05-02

Released:

2019-05-21

Last modified:

2019-10-25

Imageset size:

129.80 GB

Imageset DOI:

10.6019/EMPIAR-10094

Experimental metadata:

Download xml json

Contains:

micrographs - single frame

Image Sets

1. SBF-SEM from Gatan 3View. HeLa cell benchmark data at 10x10x50 nm voxel size. Raw DM4 format.

Category:

micrographs - single frame

Image format:

DM4

No. of images or tilt series:

518

Image size:

(8192, 8192)

Pixel type:

UNSIGNED 32 BIT INTEGER

Pixel spacing:

(100.0, 100.0)

Details:

---

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Citations

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Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

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Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

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