EMPIAR-12277 - Cryo-EM structure of human TUT1 complexed with U6 snRNA [multiple data sets in TIFF format]

EMPIAR-12277

Cryo-EM structure of human TUT1 complexed with U6 snRNA [multiple data sets in TIFF format]

Publication:

Cryo-EM structure of human TUT1:U6 snRNA complex

Yamashita S, Tomita K

Nucleic acids research (---)

Related EMDB entry:

EMD-61237 EMD-61236 EMD-61235 EMD-61234

Deposited:

2024-09-05

Released:

2025-01-20

Last modified:

2025-01-20

Imageset size:

3.45 TB

Imageset DOI:

10.6019/EMPIAR-12277

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Imageset_1

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

5903

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

- Microscope: FEI TITAN Krios
- Acceleration voltage (kV): 300
- Pixel size (A/pixel): 0.83
- Spherical aberration (Cs) : 2.7
- Defocus (nm): -800 to -1800
- Magnification:105000
- Detector: Gatan K3 BIOQUANTUM
- Average electron dose per image (e-/A2): 50
- Number of frames per image: 50
- Number of images: 5903
- Please use 'gain.mrc' as the gain reference with the y-axis flipped and no rotation.

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2. Imageset_2

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

9967

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

- Microscope: FEI TITAN Krios
- Acceleration voltage (kV): 300
- Pixel size (A/pixel): 0.83
- Spherical aberration (Cs) : 2.7
- Defocus (nm): -800 to -1800
- Magnification:105000
- Detector: Gatan K3 BIOQUANTUM
- Average electron dose per image (e-/A2): 50
- Number of frames per image: 51
- Number of images: 9967
- Please use 'gain.mrc' as the gain reference with the y-axis flipped and no rotation.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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