EMPIAR-12148 - Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry [954 multi-frame micrographs composed of 2870 frames each in EER format]

EMPIAR-12148

Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry [954 multi-frame micrographs composed of 2870 frames each in EER format]

Publication:

A stargate mechanism ofMicroviridaegenome delivery unveiled by cryogenic electron tomography

Bardy P, MacDonald CI, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NT, Traore DA, König HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PC, Antson AA

bioRxiv (2024)

DOI: 10.1101/2024.06.11.598214

Related EMDB entry:

EMD-50357

Deposited:

2024-05-06

Released:

2024-07-09

Last modified:

2024-07-09

Imageset size:

1.67 TB

Imageset DOI:

10.6019/EMPIAR-12148

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Raw eer images of native Ebor particle

Category:

micrographs - multiframe

Image format:

EER

No. of images or tilt series:

954

Image size:

(4096, 4096)

Pixel type:

BIT

Pixel spacing:

(1.2, 1.2)

Details:

total dose 50 e/A^2
collected on Falcon 4, Cs=2.7mm, Voltage=200kV
mtf of detector and gain reference can be download from empty particle EMPIAR dataset

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Citations

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

CryoPROS: Correcting misalignment caused by preferred orientation using AI-generated auxiliary particles.

Zhang H, Zheng D, Wu Q, Yan N, Peng H, Hu Q, Peng Y, Yan Z, Shi Z, Bao C, Hu M. (2025)

Few-shot learning for non-vitrified ice segmentation.

Vivas-Lago A, Castaño-Díez D. (2025)

Automated removal of corrupted tilts in cryo-electron tomography.

Majtner T, Turoňová B. (2025)

Reanalysis of cryo-EM data reveals ALK-cytokine assemblies with both 2:1 and 2:2 stoichiometries.

Felix J, De Munck S, Bazan JF, Savvides SN. (2025)

Probabilistic single-particle cryo-EM ab initio 3D reconstruction in SIMPLE.

Van CTS, Reboul CF, Caesar JJE, Meana-Pañeda R, Lountos GT, Deme JC, Bryant OJ, Johnson S, Piczak CT, Valkov E, Lea SM, Elmlund H. (2025)

Cryo-EM Structure Reconstruction by Gaussian Splatting: Pushing the Resolution to Extreme

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2025)

Molecular exaptation by the integrin αI domain.

Hollis JA, Chan MC, Malik HS, Campbell MG. (2025)

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