EMPIAR-11830 - In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling [multiple data sets in EER and MRC formats]

EMPIAR-11830

In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling [multiple data sets in EER and MRC formats]

Publication:

Towards the Visual Proteomics of C. reinhardtii using High-throughput Collaborative in situ Cryo-ET

Khavnekar S, Kelley R, Waltz F, Wietrzynski W, Zhang X, Obr M, Tagiltsev G, Beck F, Wan W, Briggs J, Engel B, Plitzko J, Kotecha A

Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada 29 (2023) 961-963

PMID: 37613825

DOI: 10.1093/micmic/ozad067.480

Related EMDB entry:

Deposited:

2024-04-09

Released:

2024-04-09

Last modified:

2024-04-09

Imageset size:

27.66 TB

Imageset DOI:

10.6019/EMPIAR-11830

Experimental metadata:

Download xml json

Contains:

tilt series
reconstructed volumes

Image Sets

1. Chlamy Visual proteomics project containing 1829 tilt series and preprocessed metadata for C. reinhardtii prepared using cryo-plasmaFIB milling

Category:

tilt series

Image format:

EER

No. of images or tilt series:

1829

Image size:

(4096, 4096)

Pixel type:

UNSIGNED 32 BIT INTEGER

Pixel spacing:

(1.96, 1.96)

Details:

A Minimal TOMOMAN (https://doi.org/10.1093/micmic/ozad067.516) project.

Files:

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2. Chlamy Visual proteomics denoised tomograms

Category:

reconstructed volumes

Image format:

MRC

No. of images or tilt series:

1829

Image size:

(1024, 1024)

Pixel type:

BIT

Pixel spacing:

(7.84, 7.84)

Details:

Denoised using CryoCARE by using workflow implemented in TOMOMAN

Files:

This entry cannot be downloaded from PDBj.

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We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

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