EMPIAR-10701 - Cryo electron tomography of FIB-milled lamella of human DLD-1 cells [3 tilt series in MRC format]

EMPIAR-10701

Cryo electron tomography of FIB-milled lamella of human DLD-1 cells [3 tilt series in MRC format]

Publication:

The cellular environment shapes the nuclear pore complex architecture

Schuller AP, Wojtynek M, Mankus D, Tatli M, Kronenberg-Tenga R, Regmi SG, Dip PV, Lytton-Jean AKR, Brignole EJ, Dasso M, Weis K, Medalia O, Schwartz TU

Nature (2021)

PMID: 34646014

DOI: 10.1038/s41586-021-03985-3

Related EMDB entry:

EMD-12811 EMD-12813 EMD-12812 EMD-12814

Deposited:

2021-04-28

Released:

2021-10-18

Last modified:

2021-11-02

Imageset size:

8.03 GB

Imageset DOI:

10.6019/EMPIAR-10701

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Un-aligned tilt series of FIB-milled lamella of Nup96-depleted human DLD-1 cells

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(5760, 4092)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(3.42, 3.42)

Details:

Un-aligned tilt series of FIB-milled lamella of Nup96-depleted human DLD-1 cells.

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Citations

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)