EMPIAR-10350 - Single particle cryo-EM dataset for LetB from E.coli [multiple data sets in MRC and MRCS formats]

EMPIAR-10350

Single particle cryo-EM dataset for LetB from E.coli [multiple data sets in MRC and MRCS formats]

Publication:

LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope

Isom GL, Coudray N, MacRae MR, McManus CT, Ekiert DC, Bhabha G

Cell 181 (2020) 653-664.e19

PMID: 32359438

DOI: 10.1016/j.cell.2020.03.030

Related EMDB entry:

EMD-20993 EMD-20999 EMD-20995 EMD-20998 EMD-21000 EMD-20996 EMD-20994 EMD-20997

Deposited:

2020-01-29

Released:

2020-05-29

Last modified:

2020-05-29

Imageset size:

928.60 GB

Imageset DOI:

10.6019/EMPIAR-10350

Experimental metadata:

Download xml json

Contains:

micrographs - single frame
picked particles - single frame - processed

Image Sets

1. Aligned, dose-weighted and non-dose-weighted micrographs

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

4905

Image size:

(3838, 3710)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

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2. Particle stacks for Model 1 (EMD-20993)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

61618

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

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3. Particle stacks for Model 2 (EMD-20994)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

57157

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

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4. Particle stacks for Model 3 (EMD-20995)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

101464

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

5. Particle stacks for Model 4 (EMD-20996)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

144219

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

6. Particle stacks for Model 5 (EMD-20997)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

147415

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

7. Particle stacks for Model 6 (EMD-20998)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

71235

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

8. Particle stacks for Model 7 (EMD-20999)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

59687

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

9. Particle stacks for Model 8 (EMD-21000)

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

21149

Image size:

(280, 280)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

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