EMPIAR-10162 - Integrative structure and functional anatomy of a nuclear pore complex [multiple data sets in TIFF format]

EMPIAR-10162

Integrative structure and functional anatomy of a nuclear pore complex [multiple data sets in TIFF format]

Publication:

Integrative structure and functional anatomy of a nuclear pore complex

Kim SJ, Fernandez-Martinez J, Nudelman I, Shi Y, Zhang W, Raveh B, Herricks T, Slaughter BD, Hogan JA, Upla P, Chemmama IE, Pellarin R, Echeverria I, Shivaraju M, Chaudhury AS, Wang J, Williams R, Unruh JR, Greenberg CH, Jacobs EY, Yu Z, de la Cruz MJ, Mironska R, Stokes DL, Aitchison JD, Jarrold MF, Gerton JL, Ludtke SJ, Akey CW, Chait BT, Sali A, Rout MP

Nature 555 (2018) 475-482

PMID: 29539637

DOI: 10.1038/nature26003

Related EMDB entry:

EMD-7321

Deposited:

2018-02-28

Released:

2019-05-08

Last modified:

2019-05-08

Imageset size:

11.79 GB

Imageset DOI:

10.6019/EMPIAR-10162

Experimental metadata:

Download xml json

Version history:

2019-05-08

REL

Added class averages.

Contains:

micrographs - single frame
class averages

Image Sets

1. Raw micrographs of Nic96 complex

Category:

micrographs - single frame

Image format:

TIFF

No. of images or tilt series:

1505

Image size:

(2048, 2048)

Pixel type:

UNSIGNED 16 BIT INTEGER

Pixel spacing:

(2.03, 2.03)

Details:

---

Files:

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2. Sc Nic96 complex class averages

Category:

class averages

Image format:

TIFF

No. of images or tilt series:

Image size:

(128, 128)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(2.03, 2.03)

Details:

Nic96 complex class averages are of 4702 particles, generated by Iterative Stable Alignment and Clustering (ISAC).

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

Outer membrane protein assembly mediated by BAM-SurA complexes.

Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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