EMPIAR-12660
FIB-SEM Chinese Hamster Ovary cell line sample dataset [multiple data sets in TIFF and PNG formats]
Publication:

Contextual High-throughput 3D Volume Electron Microscopy Data Acquisition Using Artificial Intelligence

Hurník Konečná T, Jančík R, Slamková D, Přibyl B, Tomova C, Rotkina L, Burch-Smith T, Sviben S, Fitzpatrick JAJ, Czymmek KJ

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Related EMDB entry:
Deposited:
2025-04-01
Released:
2025-06-30
Last modified:
2025-06-30
Imageset size:
1.28 GB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • reconstructed volumes
  • micrographs - single frame
1. FIB-SEM Chinese Hamster Ovary cell line sample dataset
Category:
reconstructed volumes
Image format:
TIFF
No. of images or tilt series:
1043
Image size:
(1536, 1324)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(90.0, 90.0)
Details:
Thermo Scientific Auto Slice & View (ASV), version 5 - Spin Mill
Files:
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2. FIB-SEM Chinese Hamster Ovary cell line sample dataset - annotation by user on the first slice
Category:
micrographs - single frame
Image format:
PNG
No. of images or tilt series:
1
Image size:
(1534, 1324)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(90.0, 90.0)
Details:
Manual annotation by user on the first slice.
Files:
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Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)
Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)
Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)