EMPIAR-12535
Efficient cell-wide mapping of mitochondria in electron microscopic volumes using webKnossos [multiple data sets in TIFF format]
Publication:

Efficient cell-wide mapping of mitochondria in electron microscopic volumes using webKnossos

Jiang Y, Wang H, Boergens K, Rzepka N, Wang F, Hua Y

Cell Reports Methods 5 (2025)

Related EMDB entry:
Deposited:
2025-01-24
Released:
2025-03-20
Last modified:
2025-03-20
Imageset size:
996.43 GB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
1. HuaLab-mouse-intestinal-tissue-raw
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
1000
Image size:
(6808, 5024)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(None, None)
Details:
HuaLab-mouse-intestinal-tissue-raw contains 1000 three-dimensional continuous images collected by Serial Section SEM, which have been aligned, contrast adjusted, and converted into 8-bit images with voxel resolution of 8nm * 8nm * 50nm.
Files:
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2. HuaLab-mouse-mouse-testis-tissue-raw
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
2605
Image size:
(10419, 4884)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(None, None)
Details:
HuaLab-mouse-mouse-testis-tissue-raw contains 2605 three-dimensional continuous images collected by SBF-SEM, which have been aligned, contrast adjusted, and converted into 8-bit images with voxel resolution of 15nm * 15nm * 50nm.
Files:
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3. Hualab-DCN-A23-CBA-2M-raw
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
3893
Image size:
(15303, 16449)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(None, None)
Details:
Hualab-DCN-A23-CBA-2M-raw contains 3893 three-dimensional continuous images collected by SBF-SEM, which have been aligned, contrast adjusted, and converted into 8-bit images with voxel resolution of 15nm * 15nm * 50nm.
Files:
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