EMPIAR-11720 - Regularisation by denoising lowers the size barrier of cryo-EM structure determination [multiple data sets in MRC and MRCS formats]

EMPIAR-11720

Regularisation by denoising lowers the size barrier of cryo-EM structure determination [multiple data sets in MRC and MRCS formats]

Publication:

Regularisation by denoising lowers the size barrier of cryo-EM structure determination

Kimanius D, Jamali K, Wilkinson M, Lövestam S, Velazhahan V, Nakane T, Scheres SHW

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Related EMDB entry:

EMD-17806

Deposited:

2023-10-14

Released:

2023-10-20

Last modified:

2023-10-20

Imageset size:

81.48 GB

Imageset DOI:

10.6019/EMPIAR-11720

Experimental metadata:

Download xml json

Contains:

micrographs - single frame
picked particles - multiframe - processed

Image Sets

1. Aligned movies (MotionCorr)

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

1503

Image size:

(4096, 4096)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.727, 0.727)

Details:

Autopicked particles using Topaz filament picker

Files:

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2. Polished particles

Category:

picked particles - multiframe - processed

Image format:

MRCS

No. of images or tilt series:

59124

Image size:

(384, 384)

Pixel type:

SIGNED BYTE

Pixel spacing:

(0.727, 0.727)

Details:

Polished particles used for the refinement comparisons of Blush (regularisation by denoising) vs normal relion refinement.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

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Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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