EMPIAR-11365 - Spraguea lophii 100S ribosome [multiple data sets in TIFF format]

EMPIAR-11365

Spraguea lophii 100S ribosome [multiple data sets in TIFF format]

Publication:

CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state

McLaren M, Conners R, Isupov MN, Gil-Díez P, Gambelli L, Gold VAM, Walter A, Connell SR, Williams B, Daum B

Nature microbiology (2023)

PMID: 37709902

DOI: 10.1038/s41564-023-01469-w

Related EMDB entry:

EMD-13892

Deposited:

2022-04-05

Released:

2023-09-19

Last modified:

2023-09-19

Imageset size:

9.84 TB

Imageset DOI:

10.6019/EMPIAR-11365

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Micrographs of isolated ribosomes from Spraguea lophii (dataset 1)

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

15989

Image size:

(11520, 8184)

Pixel type:

SIGNED BYTE

Pixel spacing:

(0.53, 0.53)

Details:

Micrographs of isolated ribosomes from microsporidian parasite Spraguea lophii collected in super-resolution mode with a pixel size of 0.53 Apx. Micrographs are subdivided into folders containing 2000 images or fewer.

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2. Micrographs of isolated ribosomes from Spraguea lophii (dataset 2)

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1816

Image size:

(7676, 7420)

Pixel type:

SIGNED BYTE

Pixel spacing:

(0.525, 0.525)

Details:

Micrographs of isolated ribosomes from microsporidian parasite Spraguea lophii collected in super-resolution mode with a pixel size of 0.525 Apx.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

3. Micrographs of isolated ribosomes from Spraguea lophii (dataset 3)

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

9192

Image size:

(7676, 7420)

Pixel type:

SIGNED BYTE

Pixel spacing:

(0.525, 0.525)

Details:

Micrographs of isolated ribosomes from microsporidian parasite Spraguea lophii collected in super-resolution mode with a pixel size of 0.525 Apx. Micrographs are subdivided into folders containing 2000 images or fewer.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

Outer membrane protein assembly mediated by BAM-SurA complexes.

Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

See all citations

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