EMPIAR-11038 - Human platelets in presence of SARS-CoV-2 spike protein [6 reconstructed volumes in MRC format]

EMPIAR-11038

Human platelets in presence of SARS-CoV-2 spike protein [6 reconstructed volumes in MRC format]

Publication:

Direct Cryo-ET observation of platelet deformation induced by SARS-CoV-2 spike protein

Kuhn CC, Basnet N, Bodakuntla S, Alvarez-Brecht P, Nichols S, Martinez-Sanchez A, Agostini L, Soh YM, Takagi J, Biertümpfel C, Mizuno N

Nature communications 14 (2023)

PMID: 36739444

DOI: 10.1038/s41467-023-36279-5

Related EMDB entry:

EMD-26796 EMD-26794

Deposited:

2022-04-28

Released:

2024-11-21

Last modified:

2024-11-21

Imageset size:

16.40 GB

Imageset DOI:

10.6019/EMPIAR-11038

Experimental metadata:

Download xml json

Contains:

reconstructed volumes

Image Sets

1. Reconstructed 4x binned tomograms from human platelets in presence of SARS-CoV-2 spike protein

Category:

reconstructed volumes

Image format:

MRC

No. of images or tilt series:

Image size:

(1023, 1440)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(11.04, 11.04)

Details:

The reconstructed volumes were obtained from 61 tilts

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Citations

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Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

CryoPROS: Correcting misalignment caused by preferred orientation using AI-generated auxiliary particles.

Zhang H, Zheng D, Wu Q, Yan N, Peng H, Hu Q, Peng Y, Yan Z, Shi Z, Bao C, Hu M. (2025)

Few-shot learning for non-vitrified ice segmentation.

Vivas-Lago A, Castaño-Díez D. (2025)

Automated removal of corrupted tilts in cryo-electron tomography.

Majtner T, Turoňová B. (2025)

Reanalysis of cryo-EM data reveals ALK-cytokine assemblies with both 2:1 and 2:2 stoichiometries.

Felix J, De Munck S, Bazan JF, Savvides SN. (2025)

Probabilistic single-particle cryo-EM ab initio 3D reconstruction in SIMPLE.

Van CTS, Reboul CF, Caesar JJE, Meana-Pañeda R, Lountos GT, Deme JC, Bryant OJ, Johnson S, Piczak CT, Valkov E, Lea SM, Elmlund H. (2025)

Cryo-EM Structure Reconstruction by Gaussian Splatting: Pushing the Resolution to Extreme

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2025)

Molecular exaptation by the integrin αI domain.

Hollis JA, Chan MC, Malik HS, Campbell MG. (2025)

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