EMPIAR-10660 - GluK2/K5 with L-Glu [multiple data sets in TIFF and MRCS formats]

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EMPIAR-10660

GluK2/K5 with L-Glu [multiple data sets in TIFF and MRCS formats]

Publication:

Architecture and structural dynamics of the heteromeric GluK2/K5 kainate receptor

Khanra N, Brown PM, Perozzo AM, Bowie D, Meyerson J

eLife 10 (2021)

PMID: 33724189

DOI: 10.7554/elife.66097

Related EMDB entry:

EMD-23015

Deposited:

2021-03-03

Released:

2021-03-26

Last modified:

2021-05-26

Imageset size:

3.38 TB

Imageset DOI:

10.6019/EMPIAR-10660

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
picked particles - single frame - processed

Image Sets

1. GluK2/K5 with L-Glu

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

2556

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.548, 0.548)

Details:

Dose per frame (e/A2) = 1.27

The coordinate files for the deposited GluK2-K5-L-Glu-full-length, GluK2-K5-L-Glu-ATD, and GluK2-K5-L-Glu-LBD-TMD maps are provided in STAR and CS file format.

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2. GluK2/K5 with L-Glu

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

2719

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.548, 0.548)

Details:

Dose per frame (e/A2) = 1.318

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

3. GluK2/K5 with L-Glu

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

424296

Image size:

(320, 320)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.096, 1.096)

Details:

The subtracted particle stacks were provided as two .mrcs (half1 and half2) files. The coordinate files for the GluK2/K5-L-Glu-ATD map were provided with this deposition. The coordinate files contain the particles in the final map, which is the subset of total particle stacks deposited.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

4. GluK2/K5 with L-Glu

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

424296

Image size:

(320, 320)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.096, 1.096)

Details:

The subtracted particle stacks were provided as two .mrcs (half1 and half2) files. The coordinate files for the GluK2/K5-L-Glu-LBD-TMD map were provided with this deposition. The coordinate files contain the particles in the final map, which is the subset of total particle stacks deposited.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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