EMPIAR-11705 - Single particle cryogenic electron micrographs of isolated mouse mitochondrial supercomplex I2+III2 [multiple data sets in TIFF format]

EMPIAR-11705

Single particle cryogenic electron micrographs of isolated mouse mitochondrial supercomplex I2+III2 [multiple data sets in TIFF format]

Publication:

Formation of I2+III2 supercomplex rescues respiratory chain defects

Liang C, Zhang S, Padavannil A, Beh S, Robinson D, Meisterknecht J, Koves T, Illescas M, Lim R, Johnson J, Ren S, Ya-Jun W, Kappei D, Ghelli AM, Funai K, Muoio D, Ugalde C, Wittig I, Stroud D, Letts JA, Ho L

(---)

DOI: 10.1016/j.cmet.2024.11.011

Related EMDB entry:

EMD-42137 EMD-42138 EMD-42127 EMD-42126 EMD-42125 EMD-42123

Deposited:

2023-09-21

Released:

2025-02-27

Last modified:

2025-02-27

Imageset size:

20.19 TB

Imageset DOI:

10.6019/EMPIAR-11705

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi-frame micrographs of BRAWNIN KO mouse respiratory supercomplex XL

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

11911

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.44, 0.44)

Details:

These are the raw unaligned super-resolution micrographs of isolated mitochondrial respiratory supercomplexes from BRAWNIN knock out mice, collected in March of 2023 on our in house Glacios microscope with Gatan K3 direct electron detector.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

Depending on the number and size of files to be downloaded, this can take an enormous amount of time. Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

2. Unaligned multi-frame micrographs of BRAWNIN KO mouse respiratory supercomplex XL

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6144

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.44, 0.44)

Details:

These are the raw unaligned super-resolution micrographs of isolated mitochondrial respiratory supercomplexes from BRAWNIN knock out mice, collected in April of 2023 on our in house Glacios microscope with Gatan K3 direct electron detector.

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

3. Unaligned multi-frame micrographs of BRAWNIN KO mouse respiratory supercomplex XL

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

10995

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.44, 0.44)

Details:

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

Quick Links

Browse EMPIAR

Sample Preparation Widget

Volume Browser

Tomo Viewer Prototype

Claim entries to your ORCiD

Talks and Tutorials

EMPIAR Quick tour

Publications

Re-use study

Statistics

EMPIAR in the news

COVID-19 Data Portal

EMDB

BioImage Archive

PDBe

EMNavigator@PDBj

PDBj

Citations

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy.

Krentzel D, Elphick M, Domart MC, Peddie CJ, Laine RF, Shand C, Henriques R, Collinson LM, Jones ML. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

Laser flash melting cryo-EM samples to overcome preferred orientation.

Straub MS, Harder OF, Mowry NJ, Barrass SV, Hruby J, Drabbels M, Lorenz UJ. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

CryoPROS: Correcting misalignment caused by preferred orientation using AI-generated auxiliary particles.

Zhang H, Zheng D, Wu Q, Yan N, Peng H, Hu Q, Peng Y, Yan Z, Shi Z, Bao C, Hu M. (2025)

Few-shot learning for non-vitrified ice segmentation.

Vivas-Lago A, Castaño-Díez D. (2025)

Automated removal of corrupted tilts in cryo-electron tomography.

Majtner T, Turoňová B. (2025)

Probabilistic single-particle cryo-EM ab initio 3D reconstruction in SIMPLE.

Van CTS, Reboul CF, Caesar JJE, Meana-Pañeda R, Lountos GT, Deme JC, Bryant OJ, Johnson S, Piczak CT, Valkov E, Lea SM, Elmlund H. (2025)

Reanalysis of cryo-EM data reveals ALK-cytokine assemblies with both 2:1 and 2:2 stoichiometries.

Felix J, De Munck S, Bazan JF, Savvides SN. (2025)

See all citations

Protein Data Bank Japan News

[2020-07-15]

PDBj는 2020 년 7 월에 20 주년을 맞이했습니다.

[2019-02-20]

[wwPDB] 고분자결정구조 등록 시 PDBx/mmCIF 형식 파일만 허용됩니다.

[2017-11-16]

11 월 24 일 ~ 26 일, 텔레콤 센터 빌딩 (도쿄 오다이바)에서 개최되는 「사이언스 아고라 2017」에 출전합니다

[2016-01-28]

News on 2016-1-11

See all news