EMPIAR-11270 - Amyloid fibril from the antimicrobial peptide aurein 3.3 [multiple data sets in TIFF and MRCS formats]

EMPIAR-11270

Amyloid fibril from the antimicrobial peptide aurein 3.3 [multiple data sets in TIFF and MRCS formats]

Publication:

The Cryo-EM structures of two amphibian antimicrobial cross-β amyloid fibrils

Bücker R, Seuring C, Cazey C, Veith K, García-Alai M, Grünewald K, Landau M

Nature communications 13 (2022)

PMID: 35896552

DOI: 10.1038/s41467-022-32039-z

Related EMDB entry:

EMD-14168

Deposited:

2022-09-20

Released:

2022-11-14

Last modified:

2022-11-14

Imageset size:

5.74 TB

Imageset DOI:

10.6019/EMPIAR-11270

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
picked particles - single frame - unprocessed

Image Sets

1. Unaligned movie frames of aurein 3.3 filaments

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

5514

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.85, 0.85)

Details:

Particle positions can be found in final_segments.star

Files:

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2. Extracted particles (helical segments) used in final refinement

Category:

picked particles - single frame - unprocessed

Image format:

MRCS

No. of images or tilt series:

35289

Image size:

(328, 328)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.85, 0.85)

Details:

---

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

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Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

CryoPROS: Correcting misalignment caused by preferred orientation using AI-generated auxiliary particles.

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Few-shot learning for non-vitrified ice segmentation.

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Automated removal of corrupted tilts in cryo-electron tomography.

Majtner T, Turoňová B. (2025)

Probabilistic single-particle cryo-EM ab initio 3D reconstruction in SIMPLE.

Van CTS, Reboul CF, Caesar JJE, Meana-Pañeda R, Lountos GT, Deme JC, Bryant OJ, Johnson S, Piczak CT, Valkov E, Lea SM, Elmlund H. (2025)

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