EMPIAR-10295 - Single particle cryo-EM dataset of clathrin cages suitable for subparticle extraction [multiple data sets in MRCS format]

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EMPIAR-10295

Single particle cryo-EM dataset of clathrin cages suitable for subparticle extraction [multiple data sets in MRCS format]

Publication:

Cryo-EM of multiple cage architectures reveals a universal mode of clathrin self-assembly

Smith CJ, Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y

Nature structural & molecular biology 26 (2019) 890-898

PMID: 31582853

DOI: 10.1038/s41594-019-0292-0

Related EMDB entry:

EMD-0114 EMD-0115 EMD-0118 EMD-0116 EMD-0120

Deposited:

2019-07-16

Released:

2019-10-04

Last modified:

2019-10-11

Imageset size:

19.93 GB

Imageset DOI:

10.6019/EMPIAR-10295

Experimental metadata:

Download xml json

Contains:

picked particles - multiframe - unprocessed

Image Sets

1. Clathrin cage particle images - 36 D6 barrel

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

1160

Image size:

(750, 750)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.705, 1.705)

Details:

Clathrin cage particle images of the 36 D6 barrel with C1 refinement, suitable for subparticle extraction by relion localised reconstruction

Files:

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2. Clathrin cage particle images - 32 sweet potato

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

1761

Image size:

(750, 750)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.705, 1.705)

Details:

Clathrin cage particle images of the 32 sweet potato with C1 refinement, suitable for subparticle extraction by relion localised reconstruction

Files:

This entry cannot be downloaded from PDBj.

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We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

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3. Clathrin cage particle images - 28 mini coat

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

2945

Image size:

(750, 750)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.705, 1.705)

Details:

Clathrin cage particle images of the 28 mini coat with C1 refinement, suitable for subparticle extraction by relion localised reconstruction

Files:

This entry cannot be downloaded from PDBj.

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We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

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rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

4. Clathrin cage particle images - 36 tennis ball

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

1624

Image size:

(750, 750)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.705, 1.705)

Details:

Clathrin cage particle images of the 36 tennis ball with C1 refinement, suitable for subparticle extraction by relion localised reconstruction

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

5. Clathrin cage particle images - 37 big apple

Category:

picked particles - multiframe - unprocessed

Image format:

MRCS

No. of images or tilt series:

2010

Image size:

(750, 750)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.705, 1.705)

Details:

Clathrin cage particle images of the 37 big apple with C1 refinement, suitable for subparticle extraction by relion localised reconstruction

Files:

This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

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Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

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Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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