EMPIAR-12330
Yeast P complex spliceosome [multiple data sets in TIFF format]
Publication:

Control of 3’ splice site selection by the yeast splicing factor Fyv6

Senn KA, Lipinski KA, Zeps NJ, Griffin AF, Wilkinson ME, Hoskins AA

bioRxiv (2024)

PMID: 38746449

Deposited:
2024-10-04
Released:
2025-04-24
Last modified:
2025-04-24
Imageset size:
7.04 TB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
1. Unaligned multi-frame movies of the yeast P-complex spliceosome, 81000x magnification
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
15690
Image size:
(5760, 4092)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(0.934, 0.934)
Details:
Data for grid 1, collected at the MRC LMB Krios1

Voltage 300 keV
Camera Gatan K3, super-resolution mode with 2-fold binning by EPU
Energy filter GIF, 20eV slit width
Magnification 81000
Pixel size 0.934 A/pix
Dose 40 e/A2
Exposure rate 25 e/pix/s
Exposure time 1.44s
Fractions 40 by mistake, some of the movies have 41 frames instead. Depending on your processing strategy, these might have to be removed or processed seperately to avoid bugs.

The gain reference "gainref.tiff" is provided. It can be used without rotation or flipping for RELION motion correction.

Metadata are also included for all maps deposited to the EMDB from this dataset. These are direct copies of the "run_data.star" from the Refine3D directory of the RELION project.
Files:
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2. Unaligned multi-frame movies of the yeast P-complex spliceosome, 130000x magnification
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
35423
Image size:
(5760, 4092)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(0.664, 0.664)
Details:
Data for grid 2, collected at the MRC LMB Krios3

Voltage 300 keV
Camera Gatan K3, super-resolution mode with 2-fold binning by EPU
Energy filter GIF, 20eV slit width
Magnification 130000
Pixel size 0.664 A/pix
Dose 40 e/A2
Exposure rate 25 e/pix/s
Exposure time 0.72s
Fractions 40

The gain reference "gainref.tiff" is provided. It can be used without rotation or flipping for RELION motion correction.

Metadata are also included for all maps deposited to the EMDB from this dataset. These are direct copies of the "run_data.star" from the Refine3D directory of the RELION project.
Files:
Loading...
Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)
Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)
Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)