EMPIAR-10829 - Cryo Electron Tomography of Ca.M.lanthanidiphila for subtomographic averaging of the S-layer [multiple data sets in MRC format]

EMPIAR-10829

Cryo Electron Tomography of Ca.M.lanthanidiphila for subtomographic averaging of the S-layer [multiple data sets in MRC format]

Publication:

The Polygonal Cell Shape and Surface Protein Layer of Anaerobic Methane-Oxidizing Methylomirabilis lanthanidiphila Bacteria

Gambelli L, Mesman R, Versantvoort W, Diebolder CA, Engel A, Evers W, Jetten MSM, Pabst M, Daum B, van Niftrik L

Frontiers in microbiology 12 (2021)

PMID: 34925275

DOI: 10.3389/fmicb.2021.766527

Related EMDB entry:

EMD-13672

Deposited:

2021-10-05

Released:

2021-11-01

Last modified:

2022-02-25

Imageset size:

135.75 GB

Imageset DOI:

10.6019/EMPIAR-10829

Experimental metadata:

Download xml json

Contains:

reconstructed volumes

Image Sets

1. Reconstructed tomogram of Ca. M.lanthanidiphila cell

Category:

reconstructed volumes

Image format:

MRC

No. of images or tilt series:

1452

Image size:

(4092, 5760)

Pixel type:

SIGNED BYTE

Pixel spacing:

(2.63809, 2.63809)

Details:

Aquisition according to the parameters in the .mdoc file. Tilt angles (for missing wedge compensation) are in the .tilt file

Files:

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2. Reconstructed tomogram of Ca. M.lanthanidiphila S-layer cell

Category:

reconstructed volumes

Image format:

MRC

No. of images or tilt series:

1183

Image size:

(4092, 5760)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(2.62631, 2.62631)

Details:

Aquisition according to the parameters in the .mdoc file. Tilt angles (for missing wedge compensation) are in the .tilt file

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

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Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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