EMPIAR-10455 - Single particle cryo-EM dataset of human adenovirus HAdV-D26 [stack of 8684 particles in MRCS format]

EMPIAR-10455

Single particle cryo-EM dataset of human adenovirus HAdV-D26 [stack of 8684 particles in MRCS format]

Publication:

Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data

Abrishami V, Ilca SL, Gomez-Blanco J, Rissanen I, De la Rosa-Trevín JM, Reddy VS, Carazo JM, Huiskonen JT

Progress in biophysics and molecular biology (2020)

PMID: 32470354

DOI: 10.1016/j.pbiomolbio.2020.05.004

Related EMDB entry:

EMD-11009 EMD-11008 EMD-11013 EMD-11012 EMD-11010 EMD-11011

Deposited:

2020-06-26

Released:

2020-07-06

Last modified:

2020-07-06

Imageset size:

46.46 GB

Imageset DOI:

10.6019/EMPIAR-10455

Experimental metadata:

Download xml json

Contains:

picked particles - single frame - processed

Image Sets

1. Particle stacks of human adenovirus HAdV-D26

Category:

picked particles - single frame - processed

Image format:

MRCS

No. of images or tilt series:

8684

Image size:

(1200, 1200)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.31, 1.31)

Details:

Particle images of human adenovirus D26 with alignment parameters and CTF information. Four Chimera marker files (hexon[1-4].cmm) are provided to be used for the localized reconstruction of the hexons 1-4.

MRCS files have variable numbers of images. Images are based on 38 frames of which frames 7 - 38 were used.

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Citations

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

Outer membrane protein assembly mediated by BAM-SurA complexes.

Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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