EMPIAR-10372 - Human delta protocadherin 10 full ectodomains on membranes, tomogram 3 [1 tilt series in MRC format]

EMPIAR-10372

Human delta protocadherin 10 full ectodomains on membranes, tomogram 3 [1 tilt series in MRC format]

Publication:

Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered δ-Protocadherins

Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L

Cell Reports 30 (2020) 2655-2671.e7

PMID: 32101743

DOI: 10.1016/j.celrep.2020.02.003

Related EMDB entry:

EMD-21193

Deposited:

2020-01-10

Released:

2020-07-24

Last modified:

2020-07-24

Imageset size:

55.14 GB

Imageset DOI:

10.6019/EMPIAR-10372

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Appion-Protomo tilt-series alignments

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(3710, 3838)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.836, 1.836)

Details:

Includes a full tilt-series alignment run for the published tilt-series.
To view properly, navigate to the protomo_alignments folder in Appion-Protomo.

Note: frames, leginon images, and other tilt-series alignments are in EMPIAR-10370.

Files:

Archives and downloads the selected files into an uncompressed zip file.

Depending on the number and size of files to be downloaded, this can take an enormous amount of time. Also, this feature is unstable and may not work properly, and checksums of downloaded files are not verified.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Quick Links

Talks and Tutorials

EMPIAR Quick tour

Statistics

Publications

Re-use case study

EMPIAR in the news

Claim entries to your ORCiD

COVID-19 Data Portal

EMDB

PDBe

BioImage Archive

EMNavigator@PDBj

PDBj

RCSB@PDBj

EMDataResoruce@RCSB,EMDB,NCMI

Citations

Structural basis for a Polθ helicase small-molecule inhibitor revealed by cryo-EM.

Ito F, Li Z, Minakhin L, Chandramouly G, Tyagi M, Betsch R, Krais JJ, Taberi B, Vekariya U, Calbert M, Skorski T, Johnson N, Chen XS, Pomerantz RT. (2024)

Discovery of essential kinetoplastid-insect adhesion proteins and their function in Leishmania-sand fly interactions.

Yanase R, Pruzinova K, Owino BO, Rea E, Moreira-Leite F, Taniguchi A, Nonaka S, Sádlová J, Vojtkova B, Volf P, Sunter JD. (2024)

Structural insights into the mechanism and dynamics of proteorhodopsin biogenesis and retinal scavenging.

Hirschi S, Lemmin T, Ayoub N, Kalbermatter D, Pellegata D, Ucurum Z, Gertsch J, Fotiadis D. (2024)

Sample preparation and data collection for serial block face scanning electron microscopy of mammalian cell monolayers.

Antao NV, Sall J, Petzold C, Ekiert DC, Bhabha G, Liang FX. (2024)

SPOT-RASTR-A cryo-EM specimen preparation technique that overcomes problems with preferred orientation and the air/water interface.

Esfahani BG, Randolph PS, Peng R, Grant T, Stroupe ME, Stagg SM. (2024)

See all citations

Protein Data Bank Japan News

[2024-08-21]

217 new PDB entries have been released on 2024-08-21.