EMPIAR-12377
Array Tomography of zebrafish axillary lymphoid organ - an external, experimentally accessible immune organ in the zebrafish [multiple data sets in TIFF format]
Publication:

The axillary lymphoid organ - an external, experimentally accessible immune organ in the zebrafish

Castranova D, Kenton MI, Kraus A, Dell CW, Park JS, Galanternik MV, Park G, Lumbantobing DN, Dye L, Marvel M, Iben J, Taimatsu K, Pham V, Willms RJ, Blevens L, Robertson TF, Hou Y, Huttenlocher A, Foley E, Parenti LR, Frazer JK, Narayan K, Weinstein BM

bioRxiv (2024)

Related EMDB entry:
Deposited:
2024-09-20
Released:
2024-11-06
Last modified:
2024-11-06
Imageset size:
11.35 GB
Imageset DOI:
Experimental metadata:
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Contains:
  • micrographs - single frame
1. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded club cells from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
201
Image size:
(3868, 2732)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
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2. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded immune cells from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
169
Image size:
(2250, 2256)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
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3. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded Merkel cells from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
81
Image size:
(1750, 1376)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
Loading...
4. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded solitary chemosensory cells (SCC) type 1 from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
111
Image size:
(1654, 1443)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
Loading...
5. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded solitary chemosensory cells type 2 (SCC2) from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
105
Image size:
(1965, 1461)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
Loading...
6. Aligned and contrast inverted array tomography images of heavy-metal stained, resin-embedded Goblet cells from a zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
169
Image size:
(5360, 1508)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(100.0, 100.0)
Details:
60 nm z sectioning
Files:
Loading...
7. Aligned and contrast inverted array tomography stack overview of zebrafish lobe
Category:
micrographs - single frame
Image format:
TIFF
No. of images or tilt series:
169
Image size:
(8781, 4770)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(250.0, 250.0)
Details:
Z sectioning at 60 nm and imaged at 25 nm xy pixel sampling
Files:
Loading...
Files:
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Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)