EMPIAR-12269 - Cryo electron tomography of Echovirus 30-infected cos-7 cells [6 tilt series in MRC format]

EMPIAR-12269

Cryo electron tomography of Echovirus 30-infected cos-7 cells [6 tilt series in MRC format]

Publication:

Endosome rupture enables enteroviruses to infect cells

Ishemgulova A, Mukhamedova L, Trebichalská Z, Rájecká V, Payne P, Šmerdová L, Moravcová J, Hrebík D, Buchta D, Škubník K, Füzik T, Vaňáčová Š, Nováček J, Plevka P

Communications Biology (---)

Related EMDB entry:

EMD-0189

Deposited:

2024-09-05

Released:

2024-11-21

Last modified:

2024-11-21

Imageset size:

44.72 GB

Imageset DOI:

10.6019/EMPIAR-12269

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Cryo electron tomography of Echovirus 30-infected cos-7 cells

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(None, None)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(None, None)

Details:

Tilt series:
- pixel width and height: 2.182 Å (Echovirus30_30mpi_tomo24, Echovirus30_tomo28, Echovirus30_tomo30, Echovirus30_tomo31), 5.523 Å (Echovirus30_30mpi_tomo6, Echovirus30_30mpi_tomo7)
- Number of tilts: 41
- number of columns, rows: 1918, 1854 (Echovirus30_30mpi_tomo24, Echovirus30_tomo28, Echovirus30_tomo30, Echovirus30_tomo31); 3838, 3710 (Echovirus30_30mpi_tomo6, Echovirus30_30mpi_tomo7)
- dose-symmetric tilt scheme, ± 50°, 3° tilt increment (Echovirus30_30mpi_tomo24, Echovirus30_tomo28, Echovirus30_tomo30, Echovirus30_tomo31); ± 50°, 2.5° tilt increment (Echovirus30_30mpi_tomo6, Echovirus30_30mpi_tomo7)
- rawtlt file available
Tomograms:
- pixel width and height:
Echovirus30_30mpi_tomo24: 2.182 Å
Echovirus30_30mpi_tomo6: 5.532 Å
Echovirus30_30mpi_tomo7: 11.06 Å
Echovirus30_tomo28: 2.182 Å
Echovirus30_tomo30: 2.182 Å
Echovirus30_tomo31: 4.364 Å

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Citations

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Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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