EMPIAR-12160
Comparative 3D ultrastructure of Plasmodium falciparum gametocytes [multiple data sets in TIFF format]
Publication:

Comparative 3D ultrastructure ofPlasmodium falciparumgametocytes

Evers F, Roverts R, Boshoven C, Kea-te Lindert M, Verhoef JM, Sinden RE, Akiva A, Kooij TW

bioRxiv (2023)

Related EMDB entry:
Deposited:
2024-03-24
Released:
2024-11-06
Last modified:
2024-11-06
Imageset size:
239.12 GB
Imageset DOI:
Experimental metadata:
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Contains:
  • micrographs - multiframe
1. Pf_Gametocyte_#3
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
499
Image size:
(1833, 893)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum gametocyte. Representative cell depicted in Fig. 1A. Voxel Size 5nm x 5nm x 15nm
Files:
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2. Raw Image Stack Gametocyte Sample 1
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
2627
Image size:
(4268, 2784)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for gametocyte sample #1. Voxel Size 5nm x 5nm x 15nm
Files:
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3. Raw Image Stack Gametocyte Sample 2
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
952
Image size:
(4428, 3804)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for gametocyte sample #2. Voxel Size 5nm x 5nm x 15nm
Files:
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4. Raw Image Stack Gametocyte Sample 3
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
901
Image size:
(4405, 2880)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for gametocyte sample #3. Voxel Size 5nm x 5nm x 15nm
Files:
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5. Pf_Gametocyte_#16
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
804
Image size:
(1296, 1392)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum gametocyte. Representative cell depicted in Fig. 1B. Voxel Size 5nm x 5nm x 15nm
Files:
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6. Pf_Schizont_#1
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
410
Image size:
(1230, 1386)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum schizont. Representative cell depicted in Fig. 1C. Voxel Size 5nm x 5nm x 15nm
Files:
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7. Pf_Schizont_#12
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
421
Image size:
(1476, 1314)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum schizont. Representative cell depicted in Fig. 1D. Voxel Size 5nm x 5nm x 15nm
Files:
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8. Pf_Gametocyte_#9
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
594
Image size:
(1416, 1686)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Fig. 4C / Supp. Fig. 2 Row 2. Voxel Size 5nm x 5nm x 15nm
Files:
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9. Pf_Gametocyte_#4
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
624
Image size:
(1984, 1060)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.1A Upper Cell. Voxel Size 5nm x 5nm x 15nm
Files:
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10. Pf_Gametocyte_#13
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
405
Image size:
(1290, 2010)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.1A Lower Cell. Voxel Size 5nm x 5nm x 15nm
Files:
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11. Pf_Gametocyte_#1
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
568
Image size:
(2596, 1028)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 First Row. Voxel Size 5nm x 5nm x 15nm
Files:
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12. Pf_Gametocyte_#2
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
520
Image size:
(1536, 1128)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Third Row. Voxel Size 5nm x 5nm x 15nm
Files:
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13. Pf_Gametocyte_#7
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
643
Image size:
(1368, 990)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Fourth Row. Voxel Size 5nm x 5nm x 15nm
Files:
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14. Pf_Gametocyte_#10
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
677
Image size:
(2568, 1146)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Fifth Row. Voxel Size 5nm x 5nm x 15nm
Files:
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15. Pf_Gametocyte_#15
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
590
Image size:
(1314, 1596)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.6. Voxel Size 5nm x 5nm x 15nm
Files:
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16. Pf_Gametocyte_#18
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
566
Image size:
(2616, 1128)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.11B. Voxel Size 5nm x 5nm x 15nm
Files:
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17. Pf_Gametocyte_#5
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
614
Image size:
(1996, 752)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.11C. Voxel Size 5nm x 5nm x 15nm
Files:
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18. Pf_Gametocyte_#6
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
414
Image size:
(2028, 1028)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
Files:
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19. Pf_Gametocyte_#8
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
973
Image size:
(2178, 1356)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
Files:
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20. Pf_Gametocyte_#11
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
505
Image size:
(2016, 846)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
Files:
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21. Pf_Gametocyte_#19
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
511
Image size:
(2064, 918)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
Files:
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22. Pf_Gametocyte_#14
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
267
Image size:
(1620, 1794)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
Files:
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23. Sample6_UnprocessedStack_Inlens_P1
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
348
Image size:
(13044, 4019)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for Sample #6. Part 1/3. Voxel Size 5nm x 5nm x 15nm
Files:
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24. Sample6_UnprocessedStack_InLens_P2
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
1423
Image size:
(12893, 3728)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for Sample #6. Part 2/3. Voxel Size 5nm x 5nm x 15nm
Files:
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25. Sample6_UnprocessedStack_InLens_P3
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
1234
Image size:
(10487, 4683)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Raw micrograph series for Sample #6. Part 3/3. Voxel Size 5nm x 5nm x 15nm
Files:
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26. Gametocytes #20-#50
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
31
Image size:
(None, None)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Image Stacks corresponding to additional gametocyte stacks that were used for quantification but no rendered in their entirety in any figures. Voxel Size 5nm x 5nm x 15nm
Files:
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27. Aligned Serial Sectioning Image Stack Gametocytes
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
47
Image size:
(9077, 14470)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(50.0, 50.0)
Details:
Aligned serial sectioning micrograph series for Sample #1. Voxel Size 5nm x 5nm x 80nm
Files:
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