EMPIAR-11719 - Cryogenic electron microscopy spa datset of a membrane-bound menaquinol:organohalide oxidoreductase [13783 micrographs in MRC format]

EMPIAR-11719

Cryogenic electron microscopy spa datset of a membrane-bound menaquinol:organohalide oxidoreductase [13783 micrographs in MRC format]

Publication:

Structure of a membrane-bound menaquinol:organohalide oxidoreductase

Ekundayo BE, Ni DC, Stahlberg H

nature communications (2023)

DOI: 10.1101/2023.07.04.547610

Related EMDB entry:

EMD-18148

Deposited:

2023-10-09

Released:

2023-10-23

Last modified:

2023-10-23

Imageset size:

924.98 GB

Imageset DOI:

10.6019/EMPIAR-11719

Experimental metadata:

Download xml json

Contains:

micrographs - single frame

Image Sets

1. Aligned DW micrographs of a membrane-bound menaquinol:organohalide oxidoreductase RDH complex (cryoEM SPA)

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

13783

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.51, 0.51)

Details:

Titan Krios
Pixel size (A)
0.51

Accelerating Voltage (kV)
300

Spherical Aberration (mm)
2.7

Total exposure dose (e/A^2)
60

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Citations

High-resolution ab initio reconstruction enables cryo-EM structure determination of small particles

Kim K, Li H, Clarke OB. (2025)

Self-supervised learning for generalizable particle picking in cryo-EM micrographs.

Zamanos A, Koromilas P, Bouritsas G, Kastritis PL, Panagakis Y. (2025)

In situ structure determination of conformationally flexible targets using nextPYP.

Liu HF, Zhou Y, Huang Q, Martin J, Bartesaghi A. (2025)

CryoPROS: Correcting misalignment caused by preferred orientation using AI-generated auxiliary particles.

Zhang H, Zheng D, Wu Q, Yan N, Peng H, Hu Q, Peng Y, Yan Z, Shi Z, Bao C, Hu M. (2025)

Few-shot learning for non-vitrified ice segmentation.

Vivas-Lago A, Castaño-Díez D. (2025)

Automated removal of corrupted tilts in cryo-electron tomography.

Majtner T, Turoňová B. (2025)

Reanalysis of cryo-EM data reveals ALK-cytokine assemblies with both 2:1 and 2:2 stoichiometries.

Felix J, De Munck S, Bazan JF, Savvides SN. (2025)

Probabilistic single-particle cryo-EM ab initio 3D reconstruction in SIMPLE.

Van CTS, Reboul CF, Caesar JJE, Meana-Pañeda R, Lountos GT, Deme JC, Bryant OJ, Johnson S, Piczak CT, Valkov E, Lea SM, Elmlund H. (2025)

Cryo-EM Structure Reconstruction by Gaussian Splatting: Pushing the Resolution to Extreme

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2025)

Molecular exaptation by the integrin αI domain.

Hollis JA, Chan MC, Malik HS, Campbell MG. (2025)

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