EMPIAR-10753 - Tilt-series taken from SARS-CoV-2 infected Vero cells. [multiple data sets in MRC format]

EMPIAR-10753

Tilt-series taken from SARS-CoV-2 infected Vero cells. [multiple data sets in MRC format]

Publication:

Correlative multi-scale cryo-imaging unveils SARS-CoV-2 assembly and egress

Mendonça L, Howe A, Gilchrist JB, Sheng Y, Sun D, Knight ML, Zanetti-Domingues LC, Bateman B, Krebs AS, Chen L, Radecke J, Li VD, Ni T, Kounatidis I, Koronfel MA, Szynkiewicz M, Harkiolaki M, Martin-Fernandez ML, James W, Zhang P

Nature communications 12 (2021)

PMID: 34330917

DOI: 10.1038/s41467-021-24887-y

Related EMDB entry:

EMD-12991 EMD-12992

Deposited:

2021-07-07

Released:

2021-07-23

Last modified:

2022-02-25

Imageset size:

52.66 GB

Imageset DOI:

10.6019/EMPIAR-10753

Experimental metadata:

Download xml json

Contains:

tilt series

Image Sets

1. Tilt-series taken on the periphery of SARS-CoV-2 infected Vero cells

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(4091, 5759)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.63, 1.63)

Details:

Tilt-series aligned in IMOD from motion-corrected sums (MotionCor2). Corresponding angles are provided (.tlt files).

Files:

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2. Tilt-series taken on cryolamella of SARS-CoV-2 infected Vero cells

Category:

tilt series

Image format:

MRC

No. of images or tilt series:

Image size:

(5759, 4091)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(2.13, 2.13)

Details:

Tilt-series aligned in IMOD from motion-corrected sums (MotionCor2). Corresponding angles are provided (.tlt files).

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

Browse All Files

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Citations

Small LEA proteins mitigate air-water interface damage to fragile cryo-EM samples during plunge freezing.

Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

Outer membrane protein assembly mediated by BAM-SurA complexes.

Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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