EMPIAR-10752 - Single particle cryo EM Data of a human Akirin2 proteasome complex [multiple data sets in TIFF and MRC formats]

EMPIAR-10752

Single particle cryo EM Data of a human Akirin2 proteasome complex [multiple data sets in TIFF and MRC formats]

Publication:

AKIRIN2 controls the nuclear import of proteasomes in vertebrates

de Almeida M, Hinterndorfer M, Brunner H, Grishkovskaya I, Singh K, Schleiffer A, Jude J, Deswal S, Kalis R, Vunjak M, Lendl T, Imre R, Roitinger E, Neumann T, Kandolf S, Schutzbier M, Mechtler K, Versteeg GA, Haselbach D, Zuber J

Nature 599 (2021) 491-496

PMID: 34711951

DOI: 10.1038/s41586-021-04035-8

Related EMDB entry:

EMD-12341

Deposited:

2021-07-04

Released:

2021-10-01

Last modified:

2022-02-25

Imageset size:

1.97 TB

Imageset DOI:

10.6019/EMPIAR-10752

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
micrographs - single frame
picked particles - single frame - processed

Image Sets

1. Unaligned Multiframe micrographs of Akirin2 bound to the human proteasome

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

4595

Image size:

(4092, 5760)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(1.06, 1.06)

Details:

movie files of Akirin2 recorded witha dose of 50 e-/s ona. K3 camera

Files:

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2. Motion corrected files dose weighted and summed as well as without dose weigthening

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

9190

Image size:

(4092, 5760)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.06, 1.06)

Details:

Patch motion corrected files from cryosparc

Files:

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3. Extracted particles of an Akirin2 bound proteasome

Category:

picked particles - single frame - processed

Image format:

MRC

No. of images or tilt series:

165181

Image size:

(560, 560)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.06, 1.06)

Details:

relion extracted particle stack.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)

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Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)

Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.

Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)

Molecular recognition of an odorant by the murine trace amine-associated receptor TAAR7f.

Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)

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