EMPIAR-10216
Cryo-EM structure of mouse heavy-chain apoferritin at 1.62 A [1647 multi-frame micrographs composed of 59 frames each in MRC format]
Publication:

Cryo-Electron Microscopy Methodology: Current Aspects and Future Directions

Danev R, Yanagisawa H, Kikkawa M

Trends in biochemical sciences 44 (2019) 837-848

PMID: 31078399

Related EMDB entry:
Deposited:
2018-10-04
Released:
2018-10-25
Last modified:
2022-01-31
Imageset size:
1.18 TB
Imageset DOI:
Experimental metadata:
Download xml json

Compressed by PDBj:

Image formats and pixel types shown below are those of the original, non-compressed files.

MRC movies (FoilHole*Fractions.mrc) in this entry were compressed by bzip2 (pbzip2)
by EMPIAR Japan to save space and bandwidth.

Some programs (e.g. RELION >= 4.0.1 and CryoSPARC) can process compressed movies without explicit
decompression. For other programs, movies have to be decompressed beforehand. In this case,
you might want to convert decompressed MRC movies into TIFF to save your local storage.

Original size:   3,184,166,511 kilobytes
Compressed size: 1,267,082,574 kilobytes
Contains:
  • micrographs - multiframe
1. RAW movies
Category:
micrographs - multiframe
Image format:
MRC
No. of images or tilt series:
1647
Image size:
(4096, 4096)
Pixel type:
UNSIGNED 16 BIT INTEGER
Pixel spacing:
(0.517, 0.517)
Details:
- Dataset details are in the "dataset_details.txt" file.
- "particles_data.star" provides information about all particles BEFORE polishing and CTF refinement
- "polished_CTFrefined_particles_data.star" provides information about all particles AFTER polishing and CTF refinement. Note: use this file for the refined defocus information. Particle coordinates may not be accurate
Files:
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Abe KM, Li G, He Q, Grant T, Lim CJ. (2024)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA. (2024)
Hicks CW, Rahman S, Gloor SL, Fields JK, Husby NL, Vaidya A, Maier KE, Morgan M, Keogh MC, Wolberger C. (2024)
Gusach A, Lee Y, Khoshgrudi AN, Mukhaleva E, Ma N, Koers EJ, Chen Q, Edwards PC, Huang F, Kim J, Mancia F, Veprintsev DB, Vaidehi N, Weyand SN, Tate CG. (2024)
Kofler L, Grundmann L, Gerhalter M, Prattes M, Merl-Pham J, Zisser G, Grishkovskaya I, Hodirnau VV, Vareka M, Breinbauer R, Hauck SM, Haselbach D, Bergler H. (2024)